[GENERAL]
db_adaptor = Bio::DB::SeqFeature::Store
db_args = -adaptor memory
	-dir '/webgbrowse/www/gbrowse/databases/volvox'
gbrowse root = /gbrowse
stylesheet = /gbrowse/gbrowse.css
buttons = /gbrowse/images/buttons
tmpimages = /gbrowse/tmp
link = AUTO
initial landmark=ctgA:1..10000
description = Dataset display from Sample Configuration file
show sources = 0
plugins = GFFDumper
	FastaDumper
hilite fill = yellow
hilite outline = orange
overview bgcolor = white
detailed bgcolor  = white
request timeout = 60
disable wildcards = 0
image widths = 640 800 1024
default width = 800

default features = 	Track1001
	Track1002
	Track1003
	Track1004
	Track1005
	Track1006
	Track1007
	Track1008

footer=<br><i>Configuration generated using WebGBrowse</i>

[Track1001]
feature = remark
glyph = generic
key = Sample Features
bgcolor = lightsalmon
fgcolor = black
height = 10
stranded = 1 
label = 1 
description = 1 
citation = remark Feature with Generic Glyph
link = AUTO
category = General
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO
linewidth = 1
connector = none
connector_color = black
draw_dna = 0 
canonical_strand = 0 

[Track1002]
feature = match
glyph = segments
key = Matches
bgcolor = lightgrey
fgcolor = black
height = 10
stranded = 0 
label = 1 
description = 1 
citation = Matches with Segments Glyph
link = AUTO
category = General
connector = solid
connector_color = black
draw_dna = 0 
canonical_strand = 0 
draw_target = 0 
draw_protein_target = 0 
ragged_extra = 0
show_mismatch = 0 
mismatch_color = lightgrey
true_target = 0 
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO
linewidth = 1

[Track1003]
feature = gene
glyph = gene
key = Protein Coding Genes
bgcolor = peachpuff
fgcolor = black
height = 10
label = 1 
description = 1 
label_transcripts = 0 
citation = Alternative Spliced Variants with Gene Glyph
link = AUTO
category = Genes
connector = hat
connector_color = black
draw_dna = 1 
canonical_strand = 0 
thin_utr = 1 
utr_color = lightgrey
decorate_introns = 0 
adjust_exons = 0 
implied_utrs = 0 
arrow_length = 8
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO
linewidth = 1
stranded = 0 

[Track1004]
feature = CDS:predicted
glyph = gene
key = Predicted Genes
bgcolor = white
fgcolor = black
height = 10
label = 1 
description = 1 
label_transcripts = 0 
citation = Predicted Genes with gene Glyph
link = AUTO
category = Genes
connector = hat
connector_color = black
draw_dna = 1 
canonical_strand = 0 
thin_utr = 1 
utr_color = lightgrey
decorate_introns = 0 
adjust_exons = 0 
implied_utrs = 0 
arrow_length = 8
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO
linewidth = 1
stranded = 0 

[Track1005]
feature = mRNA:exonerate
glyph = processed_transcript
key = mRNA Transcripts
bgcolor = beige
fgcolor = black
height = 10
label = 1 
description = 1 
citation = mRNA with processed_transcript Glyph
link = AUTO
category = Genes
connector = hat
connector_color = black
draw_dna = 1 
canonical_strand = 0 
thin_utr = 1 
utr_color = lightgrey
decorate_introns = 0 
adjust_exons = 0 
implied_utrs = 0 
one_cds = 0 
arrow_length = 8
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO
linewidth = 1
stranded = 0 

[Track1006]
feature = mRNA
glyph = cds
key = Frame Usage Coding Sequences
height = 30
label = 1 
description = 0 
citation = Track with CDS Glyph
link = AUTO
category = Genes
sixframe = 1 
frame0f = cadetblue
frame1f = blue
frame2f = darkblue
frame0r = darkred
frame1r = red
frame2r = crimson
gridcolor = silver
require_subparts = 0 
ignore_empty_phase = 0 
cds_only = 0 
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO

[Track1007]
feature = EST_match
glyph = segments
key = Grouped ESTs
bgcolor = lightsalmon
fgcolor = black
height = 6
stranded = 0 
label = 1 
description = 1 
citation = ESTs Grouped by Name shown with Segments Glyph
link = AUTO
category = General
connector = solid
connector_color = black
draw_dna = 0 
canonical_strand = 0 
draw_target = 0 
draw_protein_target = 0 
ragged_extra = 0
show_mismatch = 0 
mismatch_color = lightgrey
true_target = 0 
fontcolor = black
label_font = gdSmallFont
font2color = blue
desc_font = gdSmallFont
group_pattern = /.[53]$/
bump = 1 
label density = 25
bump density = 100
link_target = _self
title = AUTO
linewidth = 1

[Track1008]
feature = microarray_oligo
glyph = xyplot
key = Tiling Array Data
graph_type = boxes
graph_height = 50
scale = right
group_on = display_name
bgcolor = orange
fgcolor = orange
citation = Tiling Array Data with XY Plot Glyph
link = AUTO
category = Plots
point_symbol = none
point_radius = 4
pos_color = orange
neg_color = orange
scale_color = orange
clip = 0 
bicolor_pivot = 0
pad_left = 10
pad_right = 10